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Sterol profiles (Michellod et al. 2023)

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Figshare2023-03-02 更新2026-04-08 收录
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We analyzed the sterol content of seven species of gutless oligochaetes, belonging to the Olavius and Inanidrilus genera, as well as three species of gut-bearing annelids: <em>Capitella teleta</em>, <em>Tubifex tubifex</em> and <em>Eisenia andrei.</em> <strong>Metabolite extraction. </strong>Metabolites were extracted from the worms using the following method for metabolite profiling: Tissues from MeOH fixed worms were transferred to 2 mL screwcap tubes containing a mix of silica beads (Sigmund Linder). The residual methanol was added to the screw cap tube. The tubes were spiked with 100 µL 5α-cholestane (1 mM) and 40 µL ribitol (0.2 mg mL-1). 0.5 mL pre-cooled extraction solution (ACN:MeOH:water (v:v:v) 2:2:1) was added to each tube. Tissues were disrupted by bead beating for 2 cycles of 40 sec (4 m sec-1). The tissues were pelleted by centrifugation (9,600 x g, 2 min), and the supernatants transferred to new tubes. The pellets were extracted one more time with 1.5 mL of extraction solution. The supernatants were combined and evaporated to dryness in a vacuum concentrator without heating (approximately 1.5 h). The obtained aliquots were stored at -20°C until metabolite derivatization. <strong>Derivatization. </strong>Metabolite derivatization was performed by adding 80 µL methoxyamine hydrochloride (MeOX) dissolved in pyridine (20 mg mL-1) to the dried pellet and incubating for 90 min at 37°C using a thermomixer (BioShake iQ, Analytik Jena) under constant rotation at 1350 rpm. Following the addition of 100 µL N,O-Bis(trimethylsilyl)trifluoroacetamide (BSTFA), each extract was vortexed, and incubated for another 30 min at 37°C on a thermomixer under constant rotation at 1350 rpm. After a short centrifugation, 100 µL of the supernatant was transferred to a GC-MS vial (Insert G27, sping S27 and Mikor-KH-Vial G1; Chromatographic Service) for GC-MS data acquisition. <strong>Data acquisition.</strong> The analysis of all metabolomic samples was conducted on a 7890B GC system (Agilent Technologies) coupled to a 5977A single quadrupole mass selective detector (Agilent Technologies). The gas chromatograph was equipped with a DB-5 ms column (30 m × 0.25 mm, film thickness 0.25 µm; including 10 m DuraGuard column, Agilent Technologies) and a GC inlet liner (ultra inert, splitless, single taper, glass wool, Agilent). Helium was used as gas carrier at a constant flow (0.8 mL min-1). An Agilent 7693 autosampler injected 1 µL of derivatized sample in splitless mode. The injector temperature was set at 290°C. The temperature program started at 60°C for 2 min, then increased to 300°C at 10°C min-1, and held at 325°C for 7 min. Mass spectra were acquired in electron ionization mode at 70 eV across the mass range of 50–600 <em>m/z</em> and a scan rate of 2 scans sec-1. The retention time was locked using a standard mixture of fatty acid methyl esters (Sigma-Aldrich). For more details please refer to Michellod et al. 2023.
提供机构:
Birgel, Daniel; Violette, Marlene; Gruber-Vodicka, Harald R; Fearn, Sarah; Bien, Tanja; Michellod, Dolma; Liebeke, Manuel; Zeidler, Caroline; Dubilier, Nicole; Kleiner, Manuel
创建时间:
2023-03-02
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