Minimal dataset to test multiplexed DNA imaging (Hi-M) software pipelines
收藏NIAID Data Ecosystem2026-05-02 收录
下载链接：
https://zenodo.org/record/6351754
下载链接
链接失效反馈官方服务：
资源简介：
This is a dataset of nuclei (DAPI), and 3 multiplexed DNA imaging cycles to test and validate processing software packages, such as pyHiM (https://github.com/marcnol/pyHiM). This dataset was acquired in a nc14 Drosophila embryo.
File contents:
scan_001_RT27_001_ROI_converted_decon_ch00.tif barcode 27, fiducial
scan_001_RT27_001_ROI_converted_decon_ch01.tif barcode 27
scan_001_RT29_001_ROI_converted_decon_ch00.tif barcode 29, fiducial
scan_001_RT29_001_ROI_converted_decon_ch01.tif barcode 29
scan_001_RT37_001_ROI_converted_decon_ch00.tif barcode 37, fiducial
scan_001_RT37_001_ROI_converted_decon_ch01.tif barcode 37
scan_006_DAPI_001_ROI_converted_decon_ch00.tif DAPI
scan_006_DAPI_001_ROI_converted_decon_ch01.tif DAPI, fiducial
scan_006_DAPI_001_ROI_converted_decon_ch02.tif RNA
To test this dataset please refer to pyHiM documentation page.
创建时间：
2024-07-17
