File S1 - The Complete Mitochondrial Genome of Meloidogyne graminicola (Tylenchina): A Unique Gene Arrangement and Its Phylogenetic Implications

This supporting information file contains Figures S1–S6 and Tables S1–S5. Figure S1: Mitochondrial gene arrangement of representative nematodes. Gene and genome size are not scale. Noncoding region were not shown. Red lines below the gene order map indicate genes are encoded by the other strand. Figure S2: Predicted secondary structures of 22 tRNAs of Meloidogyne graminicola. Figure S3: Predicted stem–loop structures of two noncoding regions. A) Noncoding region of the 96-bp sequence near tRNAAsp in NCR1. B) Noncoding region of the 94-bp sequence and the truncated 34-bp sequence in the end of NCR2. C) Noncoding regions (73 bp and 82 bp) next to the 111-bp repeat unit in NCR2. Figure S4: Light micrograph of a perineal pattern of a female of Meloidogyne graminicola. Figure S5: Esterase (EST) and malate dehydrogenease (MDH) phenotypes in Meloidogyne graminicola. Figure S6: PCR product (left) by using primer pairs C2F3/1108 and the corresponding sequence (right) of cox2-tRNAHis-rrnL of Meloidogyne graminicola. (PDF)