Number of close pairs across species.

This table contains statistics of closely related strains across 43 species in our cohort. For each species, we computed the fraction of identical genome blocks for all pairs of genomes from unique hosts and recorded the number of pairs with >20%, >50%, >80% identical blocks. This table also contains the number of genomes in each species (“num_qp_samples”). Some species (e.g., Prevotella copri, Roseburia inulinivorans) have substantially fewer closely related pairs than others with comparable number of genomes.
(CSV)