five

mRNA 3'end sequencing of four human cell lines

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NIAID Data Ecosystem2026-03-13 收录
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https://www.ncbi.nlm.nih.gov/bioproject/PRJNA794041
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We developed a computational tool for APA identification and quantification (APAIQ) from RNAseq data, which is capable of identifying PAS and quantifying their expression level in a genome-wide manner. To benchmark APAIQ and other published methods, we performed mRNA 3'-end sequencing on four human cell lines, including HepG2, K562, SNU398 and THLE2. In additional, a matched conventional mRNA sequencing was also performed on K562.
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2022-01-04
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