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Curated DrugMatrix FAIR Update In Vitro Bioactivity Dataset (v1.0)

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Zenodo2025-11-10 更新2026-05-26 收录
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Title:Curated DrugMatrix FAIR Update In Vitro Bioactivity Dataset (v1.0) Description:This dataset represents the fully merged and curated DrugMatrix in vitro bioactivity dataset produced through the DrugMatrix FAIR Update Project.It integrates > 229 000 bioactivity records across 132 in vitro assays, capturing compound identifiers, targets, endpoints, units, and assay metadata, together with harmonized ontology annotations (BAO, BTO, UBERON, Cellosaurus).The dataset unifies experimental data from Eurofins Panlabs, Eurofins Discovery, and DrugMatrix archival sources into a single FAIR-compliant structure to be published in the ChEMBL database. Data follow UTF-8 text encoding. Cells without data are intentionally left blank. Provenance:All entries were curated and validated from multiple public and legacy sources: Eurofins Panlabs online protocols (no longer available) Active Eurofins Discovery assay panels and protocols DrugMatrix in vitro assay records hosted by the National Toxicology Program (NTP) Publications employing MDS Pharma Services assay protocolsAll data were verified against DrugMatrix targets and compound references to ensure traceability and FAIR alignment. Source citations are provided in the manuscript References section. Keywords:DrugMatrix; FAIR data; Eurofins Discovery; Eurofins Panlabs; in vitro bioactivity; pharmacology assays; compound–target interactions; ontology alignment; BioAssay Ontology (BAO); Opioid Drug Ontology (ODO) Contributors (Authors): Nicolette Ross — Lead Curator Stephan Schürer — Principal Investigator / Advisor Kristina Jagodnik — Project Consultant / Editor Tudor Oprea — Ontology Consultant

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Zenodo
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2025-11-03
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