Integrated single-nucleus RNA-seq dataset of mouse brain from a multi-factorial benchmarking study

This dataset contains integrated Seurat objects (`.RDS` files) derived from a systematic multi-factorial benchmarking study of single-nucleus RNA sequencing (snRNA-seq) in the mouse brain. The data has undergone rigorous quality control and integration pipelines to ensure reproducibility and ease of use. `processed_clean_seuratobject.RDS`: The complete integrated dataset encompassing all samples and cell types identified in the study. `processed_glutneuron_seuratobject.RDS`: A specialized subset filtered specifically for glutamatergic neuronal populations. `processed_mapmycell_results.RDS`: A data frame containing the processed cell type annotation labels generated by the MapMyCell pipeline. `code_ver1.zip`: Directory containing the source code (R scripts) used for analysis in this study (Version 1.0). These files are ready-to-use R objects and can be loaded directly using the readRDS() function in R.