EUKulele databases for Phaeocystis mapping (Krinos et al. 2023)
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下载链接：
https://zenodo.org/record/8269165
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资源简介：
Supplementary dataset for Krinos et al. 2023, Missing microbial eukaryotes and misleading meta-omic conclusions, bioRxiv. Each zipped folder is a different database containing some subset of the Phaeocystis references used to map against the Tara Oceans metagenomes. These folders contain a combined database and taxonomy table derived from other sequencing dataset resources which can be used directly with the EUKulele software.
`marmmetsp_all_phaeo.tar.gz` - full database including MarRef, MMETSP (Keeling et al. 2014), and all Phaeocystis references as listed in Krinos et al. (2023)
`marmmetsp_all_colonies.tar.gz` - database including MarRef, MMETSP (Keeling et al. 2014), and Phaeocystis references known to form colonies (Phaeocystis antarctica, Phaeocystis pouchetii, Phaeocystis globosa)
`marmmetsp_all_free.tar.gz` - database including MarRef, MMETSP (Keeling et al. 2014), and Phaeocystis references known not to form colonies (Phaeocystis rex, Phaeocystis jahnii, Phaeocystis cordata)
创建时间：
2023-08-22
