Assembly and annotation of Fragilaria radians transcriptome

Accessory files generated upon assembly and annotation of Fragilaria radians transcriptome. 1) File_1_orthoGroups.by_group.zip -- Assignment of orthogroups by OrthoMCL for Fragilaria radians transcripts 2) File_2_Trinotate_report.csv.zip -- Trinotate annotation for Fragilaria radians transcripts 3) File_3_salmon.isoform.TMM.EXPR.matrix.E-inputs.zip -- List of assembled transcripts ordered by expression level. Trinotate accessory scripts was used to generate this file. See https://github.com/trinityrnaseq/trinityrnaseq/wiki/Trinity-Transcript-Quantification#build-transcript-and-gene-expression-matrices for details. 4) oases_MA.fa.gz -- transcriptome assembly by Oases (merge->assemble) 5) trinity_MA.fa.gz -- transcriptome assembly by Trinity (merge->assemble) 6) oases_AM.fa.gz -- transcriptome assembly by Oases (assemble->merge) 7) trinity_AM.fa.gz -- transcriptome assembly by Trinity (assemble->merge) 8) Table_S1.xlsx -- Statistics of contaminated transcripts expressed above the 95th percentile level. 9) Table_S2.xlsx -- Transcripts annotated on the basis of Trinotate, blastp hits in diatom proteomes and protist hits against NCBI NR. 10) Table_S3.xlsx -- DE-statistics computed for 5,959 NExp/DSLT and 858 DSLT dark/light transcripts.