Ciona intestinalis (C. intestinalis Sept. 2013 KH)

High confidence set 459 tRNAs decoding standard 20 AA 458 Selenocysteine tRNAs (TCA) 1 Notable atypical predictions Anticodon/isotype mismatch 9 Unexpected anticodons 1 Other tRNA-like predictions Primary filter (tRNAscan-SE pseudogenes) 159 Secondary filter (low feature scores, possible rep. element) 56 Leu CAA 1 Ile AAT 1 Ile TAT 23 Tyr GTA 8 Isotype tRNA Count by Anticodon Total Ala AGC 5 GGC CGC 4 TGC 7 16 Gly ACC GCC 14 CCC 3 TCC 9 26 Pro AGG 4 GGG CGG 2 TGG 14 20 Thr AGT 8 GGT CGT 27 TGT 9 44 Val AAC 26 GAC CAC 14 TAC 16 56 Isotype tRNA Count by Anticodon Total Ser AGA 9 GGA CGA 14 TGA 14 ACT GCT 10 47 Arg ACG 15 GCG CCG 1 TCG 3 CCT 15 TCT 4 38 Leu AAG 11 GAG CAG 1 TAG 2 CAA 1 TAA 12 27 Isotype tRNA Count by Anticodon Total Phe AAA GAA 5 5 Asn ATT GTT 8 8 Lys CTT 19 TTT 8 27 Asp ATC GTC 7 7 Glu CTC 11 TTC 18 29 His ATG GTG 6 6 Gln CTG 11 TTG 27 38 Isotype tRNA Count by Anticodon Total Ile AAT 7 GAT CAT TAT 23 30 iMet/Met CAT 9/5 14 Tyr ATA GTA 8 8 Supres TCA CTA TTA 0 Cys ACA GCA 8 8 Trp CCA 4 4 SelCys TCA 1 1