Ping-Pong signature of 24-39nt smallRNAs regulating Transposable Elements of Spodoptera frugiperda corn strain (SfC) or rice strain (SfR) plus script enabling identification of sRNA sequences in genome sequences
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-24-39nt smallRNAs from SfR were mapped to TE consensus using the Galaxy software sRNApipe. Ping-pong signatures were identified. Results are provided in an html file pointing to the associated folder, which must be downloaded together. File: 24-39nt_smallRNAs_HOSTPLANT_SfR-PPP.html associated folder : Total_SfruRice_Size24-39_trimmed1stPool.fastq -24-39nt smallRNAs from SfC larval samples collected on host-plants were mapped to TE consensus using the Galaxy software sRNApipe. Ping-pong signatures were identified. Results are provided in an html file pointing to the associated folder. File : 24-39nt_smallRNAs_HOSTPLANT_SfC-PPP.html associated folder: SfC-HOSTPLANT_Size24-39_trimmed_3rdPool.fastq -24-39nt smallRNAs from SfC, eggs, llarvae, pupae samples reared on artificial diet were mapped to TE consensus using the Galaxy software sRNApipe. Ping-pong signatures were identified. Results are provided in an html file pointing to the associated folder. File : 24-39nt_smallRNA_DEV_SfC-PPP.html associated folder: NG-5949_DEVELOPPEMENT_Size24-39_trimmed_3rdPool.fastq -Perl script enabling identification of piRNA sequences in genome sequences Perl_script_enabling_identification_of_piRNA_sequences_in_genome_sequence.txt



