Processed count matrices, brightfield HE-images (plain and annotated), spot selection files and meta-data associated with the manuscript " Spatial Deconvolution of HER2-positive Breast Tumors Revea
TGFβ ligands act as tumor suppressors in early stage tumors but are paradoxically diverted into potent prometastatic factors in advanced cancers. The molecular nature of this switch remains enigmatic.
BackgroundChromodomain helicase/ATPase DNA-binding protein 1-like gene (CHD1L), also known as ALC1 (amplified in liver cancer 1 gene), is a new oncogene amplified in many solid tumors. Whether this ge
Additional file 1: Table S1. The collection of scRNA-seq data used in this study. Table S2. The scRNA-seq datasets of solid tumor samples used in this study. Table S3. The scRNA-seq datasets of hemato
Analysis-ready single-cell BCR and gene expression data from one ovarian cancer patient, used in the BCR + GEX Integration Tutorial. The dataset includes paired lymph node (P1_LN) and primary tumor (P
