Correlation (SDa) and MSEb (SD) between actual and predicted phenotypes for the single SNP method when varying threshold to select significant SNPs.

aStandard deviation over 10 replicates.b.cInter-family prediction, using the AD model and fitting the pedigree.dNumber of SNPs contributing to predicting unobserved phenotypes for single SNP analysis, and averaged number of SNP to predicting unobserved phenotypes in each MCMC round for multiple SNP analysis.