Additional file 12: Table S5 TRIM25-CIC-ATXN1L gene set enrichment analysis. A) Gene set enrichment analysis of upregulated discordant DE genes shared between TRIM25 vs CIC and TRIM25 vs ATXN1L. B) Ge
Sup.Table.S4: Gene sets enriched in Man2a1-null B16F10 tumors vs control tumors treated with IgG isotype control. Pre-ranked gene set enrichment analysis (GSEA) was used to perform the analysis.
FIG5_scRNA_GSEA: GSEA analysis for tumor cells expressing high ERVK-7.long over low or none ERVK-7.long in scRNAFIG5_HML2_1q22_scRNA_EXP: expression matrix quantified by Brie for ERVK-7.long and ERVK-
Columns indicate which gene set correlates with a normal (N) or irradiated (I) phenotype; the FDR associated with each correlation follows after a comma.*False Discovery Rate (FDR) denotes the probabi