Top ranked GSEA annotation terms in SLEPR Analysis Result for Comparison of NGT vs DM2 in human DM2 data.

Microarray data for human type 2 diabetes mellitus (DM2) study [23] was re-analyzed with SLEPR method to compare either NGT versus DM2 (DM2 as Exclusion/Background class in SLEPR). One-side MADe method was used in SLEPR for selection of highly expressed genes as sample-level differentiated genes in the comparison of NGT versus DM2. 1000 permutations were performed. Combined_Ranking: Combined ranking scores for terms; Permutated_P_Val: p-value of terms derived from permutated data; FDR_q_Val: FDR of terms derived from permutated data (see Materials And Methods section for details).