Integrated maize cis-regulatory elements (iCREs)

Files containing the genomic coordinates of the conserved non-coding sequences (BLSSpeller, msa_pipeline, funTFBS, and Song-2021), the accessible chromatin regions (ACRs) and the unmethylated regions (UMRs) in the maize genome version 5 employed to generate the integrated cis-regulatory-elements (iCREs), both the all and maxF1 sets. Version 1.1 include the "all" iCREs and the "maxF1" iCREs annotated to their closest gene. Version 1.2 includes an extra version of the same files as the previous one but with the genome coordinates in the maize genome version 4 (AGPv4)