Data from: A long PCR based approach for DNA enrichment prior to next-generation sequencing for systematic studies
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https://datadryad.org/dataset/doi:10.5061/dryad.kc75n
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资源简介:
Premise of the study: We present an alternative approach for molecular
systematic studies that combines long PCR and next-generation sequencing
(NGS). Our approach can be used to generate templates from any DNA source
for NGS. Here we test our approach by amplifying complete chloroplast
genomes and we present a set of 58 potentially universal primers for
angiosperms to do so. Additionally, this approach is likely to be
particularly useful for nuclear regions. Methods and Results: Chloroplast
genomes of 30 species across angiosperms were amplified to test our
approach. Amplification success varied depending on whether PCR conditions
were optimized for a given taxon. To further test our approach, some
amplicons were sequenced on an Illumina HiSeq 2000. Conclusions: Although
here we tested this approach by sequencing plastomes, long PCR amplicons
could be generated using DNA from any genome, expanding the possibilities
of this approach for molecular systematic studies.
提供机构:
Dryad
创建时间:
2013-11-04



