Additional file 3 of Phytochrome-mediated shade avoidance responses impact the structure and composition of the bacterial phyllosphere microbiome of Arabidopsis

Supplementary Material 3: Additional file 3. Euclidean clustering of the log10 relative abundances of the 141 core bacterial phyllospheric genera present in all samples, showing genus names. Taxa were classified using the SILVA database (v.138) and mothur (v.1.48.0) [60]; Quast et al., [51] from bacterial 16 S rRNA sequences present in the phyllosphere microbiomes of wild type (WT) and phyB mutant plants (phyB) either maintained in white light (W) or transferred to simulated shade (W + FR) (n = 3 for all samples).