Gene sets used in the analysis.
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Protein entries present in EggNog 1.0 [19] are first associated with unique genes and then gene origin and duplicability are assigned as summarized in Figure 1 and described in the Methods. Unique entries are Entrez genes that are unambiguously associated with RefSeq v. 37 entries [54], FlyBase FB2009_01 [55], SGD (frozen at January 5th 2010) [56], and EcoCyc v.14.0 [57]. Hs, H. sapiens; Dm, D. melanogaster; Sc, S. cerevisiae; Ec, E. coli.
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2015-12-02
