Data underlying soybean-wheat system study.

The soybean–wheat rotation system forms a crucial component of Central India’s rainfed agriculture. Although historically productive and profitable, the system’s sustainability is increasingly threatened by suboptimal nutrient management, and soil degradation under changing climate. This three-year study, conducted on small and semi-medium farms in Central India using a Participatory Technology Development (PTD) approach, aimed to evaluate how diverse nutrient management strategies influence yield, profitability, and resource use efficiency. Four nutrient management strategies were tested on small to semi-medium farms: (T1) Integrated Nutrient Management (INM) using chemical fertilizers, farmyard manure and biofertilizers, (T2) Integrated Nutrient Management using chemical fertilizers, enriched compost and biofertilizers, (T3) Soil test crop response-based fertilization, and (T4) Farmers’ conventional practice. Among the four treatments T2 achieved the highest system productivity (6.63 t ha ⁻ ¹ wheat equivalent), net returns (67,680 INR ha ⁻ ¹), and superior yield stability, under climatic variability. T3 offered moderate productivity while promoting balanced nutrient use and lower input costs. Both T2 and T3 enhanced microbial activity and soil health, while T4 led to nutrient depletion, (especially potassium), and low returns. Furthermore, the timing and distribution of monsoon rainfall significantly impacted performance and yield stability of soybean. This study highlights the critical need for integrated, site-specific, and farmer-centric nutrient management strategies to ensure sustainable productivity, profitability, and soil health under changing climatic conditions.