five

Experimentally observed effects on mRNA splicing of group B variants and predicted protein change.

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https://figshare.com/articles/dataset/_Experimentally_observed_effects_on_mRNA_splicing_of_group_B_variants_and_predicted_protein_change_/665837
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aProtein change was predicted using ExPASy Proteomics Server. (http://www.expasy.ch/); bThe classification as class 5 (pathogenic) or class 4 (likely pathogenic) was based on mono- or bi-allelic expression of the normal transcript [23], that of class 2 (likely neutral) on A-GVGD software prediction (http://agvgd.iarc.fr/). Previously characterized variants are indicated; c[22], [50]; d[22], [46]; e[22], [47], [49]; f[21]; g[19], [44], [45]; h[21], [26]; i[20], [22]; j[11], [18], [22], [48]. An asterisk indicates variants for which the observed transcript pattern differed from that reported by previous studies (see Table S6). Abbreviations: SS, splice Site (D, donor; A, acceptor); BIC, Breast Cancer Information Core (http://research.nhgri.nih.gov/bic/); HGVS, Human Genetic Variation Society (http://www.hgvs.org/mutnomen/).
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2013-02-22
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