16S rRNA metabarcoding has been used to target horse (Murgese meres) faecal microbiota Raw sequence reads

Six Murgese horse broodmares have been fed with Camelina sativa enriched pasture.Faeces were collected from each mare and samples were analysed as duplicates. Each sample underwent two independent extractions, and the resulting DNA fractions were pooled for extraction. Sequencing was performed using the Illumina universal primers for the V3-V4 regions following the public available protocoland the resulting libraries were uploaded on a MiSeq2 platform flowcell. A paired end sequencing 2X300 bp has been performed.