Additional file 20 of Loss of EZH2-like or SU(VAR)3–9-like proteins causes simultaneous perturbations in H3K27 and H3K9 tri-methylation and associated developmental defects in the fungus Podospora anserina

Additional file 20: Table S2. Distribution of H3K4me3, H3K9me3 and H3K27me3 on the complete set of P. anserina genes in wild-type background (WT) and in ΔPaKmt1, ΔPaKmt6 and ΔPaHP1 mutants. List of genes where H3K4me3 and H3K27me3 can be found overlapping in the wild-type background. Distribution of H3K4me3, H3K9me3 and H3K27me3 on a subset of P. anserina secondary metabolite gene clusters in wild-type background (WT) and in PaKmt1, ΔPaKmt6 and ΔPaHP1 mutants. ChIP_peaks, 0 means no peaks detected by MACS2, 1 means at least one peak detected by MACS2. ChIP_coverage: mapped reads after normalization (see “ChIP-seq sequencing data analysis and visualization” paragraph in “Methods” for details). All_BRICKS: H3K4me3, H3K9me3 or H3K27me3 domainograms were simplified as described in [50] to a set of discrete domains of enrichment called Blocks of Regulators In Chromosomal Kontext (BRICKs). BRICKS can be used to define domains with significant clustering of ChIP-seq signal and their boundaries, while domainograms provide an overview.