Sample data for "Live Cell Fluorescence Microscopy – An End-to-End Workflow for High-Throughput Image and Data Analysis"

This repository contains:

Sample data for the "Live Cell Fluorescence Microscopy – From Sample Preparation to Numbers and Plots" methodology paper by Zahumensky & Malinsky. The paper describes the preparation of live yeast cell samples for microscopy, the subsequent semi-automatic analysis of the microscopy images using our custom-written Fiji macros, and automatic processing of the output (Results table) from the image analys using custom-written R scripts. The data provided here are real experimental data from two publications of our group: Zahumensky et al., 2022 and Vesela et al., 2023

"Results tables" from the Fiji based analysis

Outputs of the processing of these Results tables using our R scripts, in the form of summary tables, graphs, and statistical analyses