Eukaryotic viruses encode the ribosomal protein eL40

The genome of FloV-SA2 , a cultivated marine virus in the family Mesomimiviridae (phylum Nucleocytoviricota) was sequenced and encodes both a ribosomal protein (eL40) and a Group II viral rhodopsin.
eL40-phylogeny/ contains the protein alignment trimmed and untrimmed and phylogenetic trees
Kaks/ is the input and output files from Kaks_Calculator
Rhodopsin/ contains the protein alignment trimmed and untrimmed and the phylogenetic trees. Rhodopsins_spread_sheet is the template used for phylogenetic tree annotation