Additional file 2 of Human cell-dependent, directional, time-dependent changes in the mono- and oligonucleotide compositions of SARS-CoV-2 genomes

Additional file 2: Table S1. List of SARS-CoV-2 strains used in the analysis. Table S2. List of human-and bat-CoV strains used in the analysis. Table S3. Number of SARS-CoV-2 strains in each clade isolated in each elapsed month. Table S4. Average oligonucleotide compositions for SARS-CoV-2 strains in each clade isolated in each elapsed month. Table S5. Correlation coefficients for time-dependent changes in oligonucleotide compositions of SARS-CoV-2. Table S6. Fold change in compositions between strains of the first and last month of the analysis. Table S7. Distance between the oligonucleotide composition of SARS-CoV-2 isolated in each elapsed month and that of human-CoV. Table S8. Correlation coefficients for time-series changes in the distance between oligonucleotide compositions of SARS-CoV-2 and human-CoV. Table S9. List of RNA-binding motifs. Table S10. Numbers of motif-containing loci for RNA-binding proteins whose abundance increases or decreases between strains of the first and last month of the analysis. Table S11. P-value from t-test to analyze the number of RNA-binding motif loci whose abundance increases or decreases between strains of the first and last month of the analysis. Table S12. Correlation coefficients for time-dependent changes in the number of loci containing RNA-binding motifs.