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single cell RNA sequencing of spleen mesenchymal reticular cells

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NIAID Data Ecosystem2026-03-13 收录
下载链接:
https://www.ncbi.nlm.nih.gov/sra/SRP306914
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We report the single cell transcriptome of mouse splenic mesenchymal reticular cells obtained from Ccl19-cre x R26R-EYFP mice on a C57BL/6 background. Overall design: Spleen CD45- CD31- Ter119- cells that expressed at least one of the markers CD157, PDPN and EYFP were flow cytometrically sorted and encapsulated into emulsion droplets using a Chromium Controller (10x Genomics) and libraries prepared. scRNA-seq libraries were constructed using Chromium Single Cell 3' v3 Reagent Kit according to the manufacturer's protocol. Cells were examined under a microscope and counted with a hemocytometer before loading. Libraries were run on the HiSeq2500 for 100 bp paired end Illumina sequencing.
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2022-01-10
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