Related to S11 Fig.
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https://figshare.com/articles/dataset/Related_to_S11_Fig_/27346560
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Gene lists used for IRF1 target gene analysis in S11 Fig. Sheet A in S4 Table (S11 Fig): IRF1 target gene lists obtained from GSEA datasets: https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/IRF1_01.html https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/IRF1_Q6.html ChEA Dataset https://maayanlab.cloud/Harmonizome/gene_set/IRF1/CHEA+Transcription+Factor+Targets Sheet B and C in S4 Table (S11 Fig): Comparisons were made using 1) list of cellular genes (with RNA-Seq values) upregulated in glucose media and IFN-γ treated conditions (Sheet B in S4 Table) and 2) list of cellular genes (with RNA-Seq values) upregulated in galactose media and IFN-γ treated conditions (Sheet C in S4 Table). Given the direction of comparison, positive log2 fold-change values indicate cellular genes upregulated in galactose, and negative log2 fold-change values indicate cellular genes upregulated in glucose.
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创建时间:
2024-10-30



