Additional file 4 of Transcriptomic analysis reveals protein homeostasis breakdown in the coral Acropora millepora during hypo-saline stress

Table S1. Differentially expressed genes and their GO as in the heat map Fig. 1. Table S2. Gene enrichment analysis from BiNGO in Cytoscape 3.1.1. Each gene set identifies numbers of differentially expressed genes (FDR < 0.05) in GO categories responding to salinity stress id adults or juveniles at the specified time points. Table S3. A. millepora homologues to the ER protein processing system. Results of the KEGG protein processing in the ER (nve04141) pathway searched in the A. millepora protein predictions. Log2FC values of significantly expressed (FDR < 0.05) genes in response to the treatment (hypo-saline) over the control (35 PSU). Table S4. A. millepora homologues to the peroxisome and lysosome systems. Log2FC are values of significantly expressed (FDR < 0.05) genes in response to the treatment (hypo-saline) over the control (35 PSU). Table S5 A. millepora homologues to amino acids metabolism. Log2FC are values of significantly expressed (FDR < 0.05) genes in response to the treatment (hypo-saline) over the control (35 PSU). Table S6. A. millepora homologues to membrane transporter. Log2FC are values of significantly expressed (FDR < 0.05) genes in response to the treatment (hypo-saline) over the control (35 PSU). Table S7. Comparison between differentially express (FDR < 0.05) genes in A. millepora under hypo-saline conditions and other published gene expression or proteomics data. (XLSX 130 kb) (XLSX 118 kb)