Decoding family-level features for modern and fossil leaves from computer-vision heat maps (AJB 2022): Annotated heat maps and raw data

This data item supports its primary research article in <i>American Journal of Botany</i> (Spagnuolo et al., 2022) and contains the following contributions. Please see the primary article for all explanations.<br><br>1. Complete set of annotated heat maps organized as pdfs by plant family as seen in figs. 1, 3, 4, 6 of the primary article. Blue circles indicate the top-5 squares. Additional circle indicates the top-1 square. Horizontal lines indicate 25% and 75% of blade length. Text labels include genus, species, and the Wolfe (NCLC-W) catalog number for the cleared leaf specimen.<br> a. “Anacardiaceae Annotated Heat Maps.pdf”<br>b. “Annonaceae Annotated Heat Maps.pdf” <br>c. “Apocynaceae Annotated Heat Maps.pdf” <br>d. “Betulaceae Annotated Heat Maps.pdf”<br>e. “Celastraceae Annotated Heat Maps.pdf” <br>f. “Ericaceae Annotated Heat Maps.pdf” <br>g. “Fabaceae Annotated Heat Maps.pdf” <br>h. “Fagaceae Annotated Heat Maps.pdf” <br>i. “Malvaceae Annotated Heat Maps.pdf” <br>j. “Myrtaceae Annotated Heat Maps.pdf” <br>k. “Rosaceae Annotated Heat Maps.pdf”<br>l. “Rubiaceae Annotated Heat Maps.pdf” <br>m. “Salicaceae Annotated Heat Maps.pdf”<br>n. “Sapindaceae Annotated Heat Maps.pdf”<br><br>2. Raw data of top-5 and top-1 square scores for all specimens in the 14 families as a csv file (supporting primary article fig. 2 and item 5, below). <br> a. “Spagnuolo et al Raw Data.csv”<br><br>3. Within-family mean and median top-5 and top-1 scores for all families as csv files (supporting primary article figs. 4, 5). <br> a. “Top.5 Mean Scores.csv”<br> b. “Top.1 Mean Scores.csv”<br> c. “Top.5 Median Scores.csv”<br><br>4. Within-family means and medians separated by toothed vs. untoothed and lobed vs. unlobed leaves, in separate csv files.<br>Toothed and lobed fractions are only shown for families that had toothed or lobed samples in this dataset (see table 2 of primary article).<br> a. “Toothed and Lobed Comparisons, Means.csv”<br> b. “Toothed and Lobed Comparisons, Medians.csv”<br><br>5. Box plots of top-1 scores by family for each of 21 leaf locations as pdf file. See fig. 2 of the primary article for top-5 box plots and more information. <br> a. “Spagnuolo et al top.1 Box Plots.pdf”<br><br><br>Spagnuolo, EJ, P Wilf, T Serre. 2022. Decoding family-level features for modern and fossil leaves from computer-vision heat maps. American Journal of Botany. doi: 10.1002/ajb2.1842<br><br>