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Copy number segmentations in ulcerative colitis, Gut 2025

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NIAID Data Ecosystem2026-05-02 收录
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RDS files contain genomic copy number segmentations ("segmented") and copy number alteration (CNA) calls ("calls") for Discovery and Validation cohort datasets derived from low-coverage whole genome sequencing of tissue samples. Chromosomal locations of 4,401 bins of size 500kbp can be found in the "bin_locations_4401.Rdata" Rdata file. Datasets are described in Al Bakir I, Curtius K, et al. (2025) "Low-coverage whole genome sequencing of low-grade dysplasia strongly predicts advanced neoplasia risk in ulcerative colitis" Gut. Sample IDs of 270 total samples used for final analyses are located in Discovery_samples_used.csv and Validation_samples_used.csv
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2025-01-17
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