The protists genomics RNA-Seq identification, alignment and visualisation pipeline. Protists RNA-Seq alignment
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The analysis was performed by the EMBL-EBI Gene Expression team (http://www.ebi.ac.uk/about/people/robert-petryszak) using the iRAP pipeline (http://nunofonseca.github.io/irap/). Quality-filtered reads were aligned to the latest genome reference from Ensembl via TopHat version 2 (https://ccb.jhu.edu/software/tophat/index.shtml). The resulting BAM file was then converted to CRAM (http://www.ebi.ac.uk/ena/software/cram-toolkit) format.
创建时间：
2016-09-23
