基因表达综合数据库中肝癌RNA芯片(GSE14520)
收藏国家人口健康科学数据中心2026-06-01 收录
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https://www.ncmi.cn/phda/dataDetails.do?id=CSTR:A0006.11.A0014.202009.205.V1.0
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GSE14520数据集包含有生存信息的221例被诊断为肝细胞癌的患者,所有样本收集于中国,且患者都存在HBV病毒感染。该数据集中的RNA表达定量由Affymetrix芯片平台完成,而非之前提到的二代测序技术。其中RNA的表达量是根据芯片中的荧光强度进行计算,使用了Affymetrix 配套软件对荧光信号强度进行分析。数据标准化使用了全局归一化(RMA)算法进行校正分析,随后进行了对数话转换。
The GSE14520 dataset encompasses 221 patients diagnosed with hepatocellular carcinoma (HCC) with available survival information. All samples were collected in China, and all enrolled patients were infected with hepatitis B virus (HBV). RNA expression quantification in this dataset was performed using the Affymetrix microarray platform, rather than the previously mentioned next-generation sequencing technology. Specifically, RNA expression levels were calculated based on the fluorescence intensity from the microarray, and the fluorescence signal intensity was analyzed using Affymetrix-supplied software. Data normalization and correction were carried out using the robust multi-array average (RMA) algorithm, followed by logarithmic transformation.
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复旦大学创建时间:
2021-12-10
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