Polystomatidae_MAFFT_alignment

Multiple sequence alignments of the family Polystomatidae, based on the markers 12S, 18S, 28S and cox1 and the corresponding Maximum Likelihood trees inferred with IQtree. The full_taxa_set alignment includes taxa from across Polystomatidae whereas the reduced_taxa_set alignment is restricted to taxa from the "Polbatrach" clade. These are the alignments used to construct the phylogeny of Polystomatidae in the paper "Amended diagnosis, mitochondrial genome, and phylogenetic position of Sphyranura euryceae (Neodermata, Monogenea, Polystomatidae), a parasite of the Oklahoma salamander."

基于标记12S、18S、28S和cox1的多序列比对，以及使用IQtree推断出的对应最大似然树，本数据集收录了多态科（Polystomatidae）家族的多个物种。其中，全物种比对集涵盖了多态科各物种的比对数据，而简化物种比对集则仅限于“Polbatrach”类群的物种。这些比对数据被用于构建论文《修订的诊断、线粒体基因组及Sphyranura euryceae（新皮亚目、单殖吸虫、多态科）的系统发育位置——一种俄克拉荷马蝾螈的寄生虫》中多态科的系统发育树。