Additional file 1: of Exploratory bioinformatics investigation reveals importance of â junkâ DNA in early embryo development

Table S1. Stage-specific expression level of 36882 genes, calculated using the formula log2 (FPKM + 1). Table S2. Gene lists of 10 gene clusters defined in Figure 1B. Table S3. Expression levels of transposable elements in mouse embryos at different stages. Table S4. List of all repetitive elements (REs) in the mouse genome with repeat name, repeat family, and repeat class. Table S5. Frequencies of REs in the promoters of different gene clusters. Table S6. List of 117 genes that contain ERVL elements in promoters and show an expression pattern similar to these LTRs. (XLSX 4556 kb)