Table S2. from Protein aggregation and the evolution of stress resistance in clinical yeast

<b>Protein abundance in the aggregate fraction of [<i>RNQ</i>⁺][<i>psi</i>⁻], [<i>rnq</i>⁻][<i>psi</i>⁻], and [<i>RNQ</i>⁺][<i>PSI</i>⁺] in comparison with total proteomic data and stress granule proteome.</b> Protein abundance (measured in peptide spectra count “PSM” and expressed in parts per million “ppm”) in isolated aggregates from [<i>RNQ</i>⁺][<i>PSI</i>⁺], [<i>RNQ</i>⁺][<i>psi</i>⁻], and [<i>rnq</i>⁻][<i>psi</i>⁻] strains are tabulated in Total Protein sheet. The comparison between stress granule and p-body were tabulated in Stress Granule P-body sheet. The ribosomal proteins identified in aggregate from [<i>RNQ</i>⁺][<i>PSI</i>⁺], [<i>RNQ</i>⁺][<i>psi</i>⁻], and [<i>rnq</i>⁻][<i>psi</i>⁻] strains were tabulated in Ribosomal Proteins sheet. The known yeast abundance from unified whole proteome quantification was listed for comparison [17]. Both the total proteome dataset and the aggregate isolation described in here were obtained from cells harvested during mid-exponential phase in YPD medium. The abundance in parts per million for [<i>RNQ</i>⁺][<i>PSI</i>⁺], [<i>RNQ</i>⁺][<i>psi</i>⁻], and [<i>rnq</i>⁻][<i>psi</i>⁻] strains were calculated by normalizing spectral counts of individual proteins by total spectral counts per samples and multiplying one million. Columns with a “PSM-Sol” suffix was abundance measures for the fraction that was SDS-soluble whereas columns with a “PSM-Res” suffix was the fraction that was SDS-resistant.