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Table S2 from Cornet et al. Consensus assessment of the contamination level of publicly available cyanobacterial genomes.

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Figshare2018-04-15 更新2026-04-29 收录
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This Excel file is Table S2: Global ranking of the cyanobacterial genome assemblies. The table gives the accession, the name (binomial incl. strain), the main assembly properties (as determined by QUAST), and the ranking results of the 440 assemblies surveyed. Assemblies are sorted from the most contaminated to the less contaminated. (*) indicates assemblies for which raw read data are in principle available for download from NCBI SRA; (˚) indicates assemblies that are devoid of SSU rRNA (16S) classified as Cyanobacteria; (+) indicates assemblies that are too large (>15,000 kbp); (-) indicates assemblies that are too small (<500 kbp). Assemblies included in the reference database have their Kraken contamination level set to missing data (NA).
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2018-04-15
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