MS-BioGraphs MSA50

https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs/

Name
MS-BioGraphs – MSA50

URL
https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-MSA50

Graph Explanation
Vertices represent proteins and each edge represents the sequence similarity between its two endpoints

Edge Weighted
Yes

Directed
Yes

Number of Vertices
1,757,323,526

Number of Edges
125,312,536,732

Maximum In-Degree
543,117

Maximum Out-Degree
297,981

Minimum Weight
98

Maximum Weight
634,925

Number of Zero In-Degree Vertices
6,437,984

Number of Zero Out-Degree Vertices
8,542,018

Average In-Degree
71.6

Average Out-Degree
71.7

Size of The Largest Weakly Connected Component
117,980,151,055

Number of Weakly Connected Components
363,090,851

Creation Details
MS-BioGraphs: Sequency Similarity Graph Datasets

Format
WebGraph

License
CC BY-NC-SA

QUB IDF
2223-052

DOI
10.5281/zenodo.7820821

Citation

Koohi Esfahani, Mohsen, Boldi, Paolo,
Vandierendonck, Hans, Kilpatrick, Peter,
Vigna,Sebastiano. (2023).
MS-BioGraphs - MSA50.
https://doi.org/10.5281/zenodo.7820821.
http://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-MSA50.

Bibtex

@misc{MS-BioGraphs-MSA50,
year = {2023},
author = {Mohsen Koohi Esfahani and Paolo Boldi and
Hans Vandierendonck and Peter Kilpatrick and
Sebastiano Vigna},
title = {{MS-BioGraphs - MSA50}},
doi = {10.5281/zenodo.7820821},
url = {http://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-MSA50},
howpublished= {\url{http://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-MSA50}}}