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T. Bryosalmonae Transcriptome Assembly Fasta Files

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DataCite Commons2024-02-20 更新2024-07-28 收录
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https://figshare.com/articles/dataset/T_Bryosalmonae_Transcriptome_Assembly_Fasta_Files/11889672
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资源简介:
This repository contains the intersect transcriptome of the myxozoan parasite <i>Tetracapsuloides bryosalmonae </i>isolated from two hosts; Bryozoan and Rainbow Trout. <br>The transcriptome of <i>T. brysosalmonae </i>was assembled separately from each host, and then all transcripts present in both assemblies (as determined by reciprocal blast) were identified to form the "Intersect transcriptome".<br>For more details on the materials and methods, please refer to the publication. <br>For completeness, we have also included the transcriptome assemblies used at all stages of analysis as follows:invert_intersect.fa - final intersect transcriptome fish_derived_contigs.fa - assembly of all reads from Fish hostfish_filtered.fa - assembly of reads from Fish host after filtering with fish genomes.invert_all.fa - assembly of all reads from Bryozoan hostinvert_filtered.fa - assembly of reads from Bryozoan host after filtering with <i>T. bryosalmonae </i>draft genome<br>
提供机构:
figshare
创建时间:
2020-02-24
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