RNAseq analyses of pathogenic Burkholderia glumae under in vitro and in vivo conditions. Burkholderia glumae BGR1

We analyzed B. glumae transcriptome from infected rice tissue using an RNAseq technique. To identify unique expression of B. glumae genes within rice tissues, we compared in vivo transcriptome data of B. glumae to in vitro data. To accomplish this, we analyzed differentially expressed genes (DEGs) and identified 2,906 transcripts that were significantly altered. Overall design: Three in vitro (culture) and three in vivo (in plant) RNAseqs in B. glumae