Mindboggle-101 manually labeled individual brains
收藏DataONE2019-04-03 更新2024-06-08 收录
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The Mindboggle-101 dataset is part of the Mindboggle project (http://mindboggle.info) and includes anatomically labeled brain surfaces and volumes derived from magnetic resonance images of 101 healthy individuals. The manually edited cortical labels follow sulcus landmarks according to the Desikan-Killiany-Tourville (DKT) labeling protocol: \"101 labeled brain images and a consistent human cortical labeling protocol\" Arno Klein, Jason Tourville. Frontiers in Brain Imaging Methods. 6:171. DOI: 10.3389/fnins.2012.00171 Data and License All labeled data, including nifti volumes (nii), vtk surfaces (vtk), and FreeSurfer files (mgh, etc.) for each scanned \"GROUP\" (OASIS-TRT-20, NKI-TRT-20, NKI-RS-22, MMRR-21, HLN-12, etc.) are licensed under a Creative Commons License. These brains are in their original space as well as affine-registered to \"MNI152space\": [GROUP]_volumes.tar.gz SurfaceLabels_[GROUP].tar.gz The manually labeled subcortical portions of the \"WholeBrain\" OASIS-TRT-20 labels are licensed under a similar Creative Commons License: WholeBrain_VolumeLabels_OASIS-TRT-20.tar.gz WholeBrain_VolumeLabels_OASIS-TRT-20_MNI152space.tar.gz The following code and documentation files are also included: CHANGELOG.txt: log of changes code_prep_WholeBrain_OASIS-TRT-20_labels.txt: preprocessing code for volumes* code_[re]postprocess_Mindboggle101_data.txt: postprocessing code code_resample2mm.txt: resampling code label_definitions.txt: labeling protocol (see above article) labels_on_fsaverage_surfaces.png: example labels subject_list_Mindboggle101.txt: list of subjects subject_scans_info_Mindboggle101.tar.gz: information about the scans subject_sources_Mindboggle101.txt: scan sources subject_table_Mindboggle101.pdf: table of subjects ShapeTables_mindboggle_20141017.tar.gz: features and shapes output by Mindboggle software
Mindboggle-101数据集隶属于Mindboggle项目(http://mindboggle.info),包含101名健康个体的磁共振成像(Magnetic Resonance Imaging, MRI)衍生的经解剖学标注的大脑表面与体数据。经人工编辑校正的皮层标注依据脑沟地标,遵循Desikan-Killiany-Tourville(DKT)标注协议,相关研究成果为《101 labeled brain images and a consistent human cortical labeling protocol》,作者为Arno Klein与Jason Tourville,发表于《Frontiers in Brain Imaging Methods》第6卷,文章编号171,DOI: 10.3389/fnins.2012.00171。
数据及许可:所有标注数据,包括各扫描群组(OASIS-TRT-20、NKI-TRT-20、NKI-RS-22、MMRR-21、HLN-12等)的神经影像信息学技术倡议(Neuroimaging Informatics Technology Initiative, NIfTI)体数据(nii格式)、可视化工具包(Visualization Toolkit, VTK)表面数据(vtk格式)以及FreeSurfer文件(mgh格式等),均采用知识共享许可协议(Creative Commons License)进行授权。这些大脑图像既保留了原始空间坐标,同时也经过仿射配准至MNI152空间,相关打包文件包括:[GROUP]_volumes.tar.gz、SurfaceLabels_[GROUP].tar.gz。
“WholeBrain” OASIS-TRT-20标注中经人工标注的皮层下部分,同样采用类似的知识共享许可协议进行授权,相关打包文件为:WholeBrain_VolumeLabels_OASIS-TRT-20.tar.gz、WholeBrain_VolumeLabels_OASIS-TRT-20_MNI152space.tar.gz。
本次数据集还附带以下代码与文档文件:
1. CHANGELOG.txt:变更日志
2. code_prep_WholeBrain_OASIS-TRT-20_labels.txt:针对体数据的预处理代码
3. code_[re]postprocess_Mindboggle101_data.txt:Mindboggle-101数据集的后处理代码
4. code_resample2mm.txt:重采样代码
5. label_definitions.txt:标注协议(详见上述论文)
6. labels_on_fsaverage_surfaces.png:标注示例图
7. subject_list_Mindboggle101.txt:受试者列表
8. subject_scans_info_Mindboggle101.tar.gz:扫描相关信息包
9. subject_sources_Mindboggle101.txt:扫描来源说明
10. subject_table_Mindboggle101.pdf:受试者一览表
11. ShapeTables_mindboggle_20141017.tar.gz:由Mindboggle软件输出的特征与形状数据
创建时间:
2023-11-21
搜集汇总
数据集介绍

以上内容由遇见数据集搜集并总结生成



