Antibiotic Resistance Microbiology Dataset Mass General Brigham (ARMD-MGB)

The Antibiotic Resistance Microbiology Dataset - MGB (ARMD-MGB) is a de-
identified resource derived from electronic health records (EHR) that
facilitates research in antimicrobial resistance (AMR). ARMD-MGB encompasses
data collected from over 225,000 adult patients over 10 years from hospitals
in the Mass General Brigham healthcare system. The focus of the data is on
over 970,000 microbiological cultures, with associated antibiotic
susceptibilities, and clinical and demographic features of the patients who
submitted the samples. Key attributes include organism identity, semi-
quantitative antibiotic susceptibility results, susceptibility phenotypes, and
de-identified clinical metadata.

The ARMD-MGB dataset is designed to complement the ARMD-Stanford dataset.
Cohort inclusion and exclusion criteria, feature descriptions, and encoding
are similar across sites. These datasets support studies on antimicrobial
stewardship, causal inference, and clinical decision-making, and are designed
to be reusable and interoperable, promoting collaboration and innovation in
combating AMR.