Additional file 1 of Comprehensive evaluations of individual discrimination, kinship analysis, genetic relationship exploration and biogeographic origin prediction in Chinese Dongxiang group by a 60-plex DIP panel
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Additional file 1: Supplementary Table I. The detailed information of the target Chinese Gansu Dongxiang group and 33 reference populations. Supplementary Table II. The p values of Hardy-Weinberg equilibrium (HWE) tests of the 57 A-DIPs among Dongxiang group and 33 reference populations. Supplementary Table III. The p values of the LD tests of 57 A-DIPs in Chinese Gansu Dongxiang group. Supplementary Table IV. The insertion and deletion allelic frequencies of 57 A-DIPs in Chinese Gansu Dongxiang group. Supplementary Table V. The forensic parameters (He, Ho, MP, PIC, PD, PE, and TPI) of 57 A-DIPs in Chinese Gansu Dongxiang group. Supplementary Table VI. The accuracies and false positive ratios of full sibling identifications with different LR limits (1, 10, 100, 1000 and 10,000) by 57 A-DIPs system among 13 East Asia populations. Supplementary Table VII. The pairwise FST values between Chinese Gansu Dongxiang group and 33 reference populations. Supplementary Table VIII. The pairwise DA values among Chinese Gansu Dongxiang group and 33 reference populations. Supplementary Table IX. The In values between Chinese Gansu Dongxiang group and 33 reference populations. Supplementary Table X. The confusion matrixes and statistics of the RF, XGBoost, SVM and DT models for the biogeographic origin predictions of the five continents.
提供机构:
Bai, Xiaole; Chen, Man; Lei, Fanzhang; Zhu, Bofeng; Fang, Yating; Yao, Hongbin; Zhang, Xingru; Cui, Wei
创建时间:
2024-08-13



