Information of the four genes showing inverse correlation patterns with Lrp identified by BEST when applied to the 100-gene test set selected from the <i>E. coli</i> microarray compendium.

All but the first one, gcvB, are in the RegulonDB target set. aGenes displayed here are sorted by the Log Bayes ratio (target gene versus non-target gene). bBlank indicates that the target gene shows the same pattern as the query gene. Negative indicates that the target gene shows the inversed pattern as the query gene. c“X” indicates that the predicted gene is in the RegulonDB target set. d“X” indicates that the gene is predicted by CLR as a target gene. eMotif distance is defined as the distance between the start position of the gene and the closest motif in the intergenic region upstream. fEmpirical p-value indicates the significance of conservation in the current motif, which is calculated as proportion of all possible motif locations in the complete E. coli genome that have likelihood ratios comparing between Lrp motif and background higher than that of the current motif.