GRCh38.p14 Reference FASTA (bgzip'd with faidx)

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https://zenodo.org/record/5572838

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资源简介：

This is derived from https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/405/GCF_000001405.40_GRCh38.p14/GCF_000001405.40_GRCh38.p14_genomic.fna.gz. It has been recompressed with bgzip and indexed with samtools: curl -#fSL https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/405/GCF_000001405.40_GRCh38.p14/GCF_000001405.40_GRCh38.p14_genomic.fna.gz -o genomic.fna.gz gunzip genomic.fna.gz cat genomic.fna | sed -r 's/^>(NC_0+([0-9]+)\.*)/>chr\2 \1/g' > chrfix.fna bgzip -c chrfix.fna > reference.fna.bgz samtools faidx reference.fna.bgz tar -czvf GRCh38_reference_fasta.tar reference.fna.bgz reference.fna.bgz.fai reference.fna.bgz.gzi This tar file contains: reference.fna.bgz reference.fna.bgz.fai reference.fna.bgz.gzi

创建时间：

2022-11-04

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