NCBI accession metadata for transcriptomic expression sequences from cultures of Alteromonas macleodii MIT1002 grown with bacterial extracellular vesicles as a carbon source

To examine how marine bacteria utilize extracellular vesicles as a nutrient source, we compared the transcriptomic response of Alteromonas macleodii MIT1002 cells grown on purified extracellular vesicles (purified from Alteromonas MIT1002 or Prochlorococcus MIT9312) as compared to glucose or a no-carbon control. Our study provides insights into the cellular mechanisms through which these cells may take up extracellular vesicle material and the specific types of molecules within vesicles that can be utilized for carbon and/or energy.

This dataset contains accession metadata for sequences run from cultures of Alteromonas macleodii MIT1002. Data were collected by Dr. Ashley Stein and Dr. Steven Biller, Wellesley College. The raw RNAseq reads have been deposited in the National Center for Biotechnology Information (NCBI) GEO database under accession GSE314643.