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Data from: The origin of the odorant receptor gene family in insects

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Mendeley Data2024-06-25 更新2024-06-29 收录
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https://datadryad.org/stash/dataset/doi:10.5061/dryad.p2t8170
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Thermobia domestica genome assembly v 1.0The Thermobia domestica genome assembly is based on a single individual from a laboratory colony. Briefly, we sequenced the DNA extracted from a single T. domestica individual for assembly with the DISCOVAR v1 pipeline (Weisenfeld et al., 2014). Quality assessment of the resulting assembly was based on standard N statistics, k-mer distribution analysis, and the BUSCO v2 pipeline (Simão et al., 2015) as previously described (Brand et al., 2017).Tdom_v1.0.tgzOR sequences of annotated speciesFASTA format proteins for the newly described ORs of Ladona fulva, E. danica, T. domestica, M. hrabei. Suffixes, which are not part of the gene/protein name but indicate features of the gene model, are C – C-terminus missing, F – assembly was repaired, I – internal regions missing, J – gene model spans scaffolds, P – pseudogene.OR_sequences.faOR alignment used for gene tree reconstruction (Figure 2., Figure S2)CLUSTALX v2 alignment of all newly described ORs together with the 3 T. domestica ORs described by Missbach et al. 2014 and several neopteran Orcos.OR_alignment.fa
创建时间:
2023-06-28
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