Additional file 2 of Identifying novel regulatory effects for clinically relevant genes through the study of the Greek population

Additional file 2: Supplementary Table S1. eQTLs in GM adipose tissues. Supplementary Table S3. GenotypexObesity significant (p<0.05) interactions in GM. Supplementary Table S4. GenotypexSex significant (p<0.05) interactions in GM. Supplmentary Table S5. eQTLs in GM tissues, when including obesity status as a covariate. Supplementary Table S6. Missense significant (FDR<5%) ASE SNPs identified in each tissue of GM. Supplementary Table S7. Replication of eQTLs across GM tissues. Supplementary Table S8. Detection of GM eQTLs using a linear mixed model with a Genotype×Tissue interaction term (FDR<0.05). Supplementary Table S9. Thirty-five eGenes identified in one GM tissue only by both p-value enrichment analysis and linear mixed model with a Genotype×Tissue interaction term. Supplementary Table S10. Replication of eQTLs across populations for each tissue. Supplementary Table S11. Thirty-two eGenes identified in both GM tissues, but not in GTEx-am. Supplementary Table S12. GWAS-eQTL colocalizations (RTC≥0.9) in GM for each tissue. Supplementary Table S14. Sharing of eGene-trait pairs in GM and GTEx-am. Supplementary Table S15. Expression levels of eGenes corresponding to GM specific eGene-trait pairs in GM and GTEx-am. Supplementary Table S16. Secondary, and not primary, eQTL colocalizations with GWAS signals in GM.