Processed spatial transcriptomics data from three human glioblastoma samples

This dataset contains processed spatial transcriptomics data from three human glioblastoma samples: B783T, B962T and B996T. Each sample has a stored data extent of 5 x 5 mm and a separate local coordinate system. The files include full-gene unnormalized integer count matrices at acquisition positions and at 25-micrometer and 50-micrometer spatial bins, annotated cell-object count matrices, spatial coordinates, registered same-section ssDNA images, nuclear-label images and aligned neighboring-section tissue images. Cell objects were selected by centroid position; some complete objects may extend beyond the image extent. Gene-position and binned matrices contain RNA within the stored sample extent. This deposit contains processed data only, with no FASTQ or BAM files.