Supporting Data for: Fluctuations in somatic cell count and their impact on individual goat milk quality throughout lactation

A cohort of 40 goats was selected from the Livestock Production Research Centre (SHF at the Norwegian University of Life Sciences Ås, Norway. Throughout the study, a total of 360 milk samples were collected from the sampler of the milking machine.
The somatic cell count (SCC) is used by the dairy industry as an indicator of milk quality and udder health. However, in goats, its reliability is significantly masked by non-infectious variables such as the milk secretion process and physiological lactation changes. Additionally, notable individual variability between goats might exist. This study aimed to investigate fluctuations in SCC in individual goats during an entire lactation and to examine the relationship between SCC and milk parameters such as bacterial count and chemical composition. Individual milk samples from forty Norwegian dairy goats from the University herd were collected monthly across an entire lactation including the pasture period. The goats were categorized based on SCC levels to analyze patterns in chemical components within these groups. Notably, goats exhibited increased SCC and decreased bacterial counts when moved to summer grazing pastures. At that stage milk samples from goats with the highest SCC (>2 000 000 cells/mL) showed a distinct decrease in individual bacterial counts (IBC). Several milk components, especially lactose, protein, and various minerals were affected by the SCC level, as well as pH. These effects were further amplified when considering the interaction with the lactation stage, influencing a broader range of variables. The results presented in this study provide new insights into the SCC`s effect on milk composition and its critical role. These insights underscore the necessity for establishing lactation-specific thresholds for interpretation, as well as for making adjustments in quality payments.